Get Started Guides

Get started with Free and Personal Plans

A Simple Guide to Making the Most of SpeciesHub Using Free or Personal Plans

Getting started is easy. Here are several ways to start using SpeciesHub:

Explore the Basics

 Watch our introductory video to learn about SpeciesHub's key features and concepts.

           
                         

Add Your First Observation

Adding an observation is straightforward and can be done either through the Sites or Map page. Use the Sites option when you are physically present at the observation site or when you have precise coordinates to enter. The Map feature is especially useful on mobile devices as it allows you to pin the exact location for your observation.

Follow these simple steps to add your observation:

  1. Navigate to the Sites or Map section of the app.
  2. Click the Add button (located in the top left corner on desktop or the bottom left corner on mobile).
  3. Enter the scientific name of the species, the date, the type of observation, and any other relevant fields.
  4. Click Next.
  5. Fill in any additional data fields provided and then click Save.
For a more detailed explanation on how to add observations and to make the most of the available fields, please refer to our support article titled How to Add an Observation.
Bring Your Existing Data

If you have observations stored in a spreadsheet, you can easily import them into SpeciesHub. Here's a general overview of the upload process:

  1. Prepare your data: Format your table of observations according to the SpeciesHub template (download here). Refer to our support article, "Preparing a Table for Upload to SpeciesHub",   for detailed instructions.
  2. Upload the file: Navigate to the Upload page within SpeciesHub. Select the spreadsheet containing your observations. The application will analyze your file, identify potential issues, and display data previews. If everything is in order, proceed with the upload process. Refer to our support article, "How to Upload a Dataset", for detailed guidance.
  3. Monitor the upload: The upload will commence in the background. You'll receive a notification once the upload is complete. Refresh the app to view the newly imported sites.

Note: Free users are limited to 200 kilobyte spreadsheets, while premium users can upload files up to 2 MB.

Connect with Others

SpeciesHub can be used by individual researchers, but if you work with others, you can create or join a group. Observations owned by a group will be visible to all group members:

How to Create group:

  1. Go to Group page and click on Add button.
  2. Type the group name, add email addresses of group members, and select their roles.
  3. Click Save to send invitations.

How to Join group:

  • Due to privacy concerns, group lists are private. You should provide your email address to group administrators for them to add you to the group.

Note: Free users can be members of up to 5 groups. Users using Personal plan have no group limit. 

Access on Any Device

SpeciesHub is designed to work seamlessly on various devices, including PCs, tablets, and smartphones. Access all our data conveniently through your web browser or by downloading our Android app from the Google Play Store.

Get started with SpeciesHub Organization plan

A Simple Guide to Making the Most of SpeciesHub Using Organisation Plan

Getting started for organizations is a bit different than for private experts. Here are several things to keep in mind.

Create Organisation

An organization allows you to manage a list of users who can utilize SpeciesHub premium features. Any organization member can belong to as many groups as desired. In the Organization page, you can manage your organization, add or remove users, change the organization name, or adjust the number of seats. When a user is added to the organization, they will receive a notification within SpeciesHub, or if they are not a user, a welcoming email will be sent.

Create Groups

It is a good idea to separate users into groups. For small organizations, a single group where all members see all data might be sufficient. However, in most cases, having multiple groups is the best approach. You can separate members by department, project, or team. This ensures that users only see the data relevant to their roles, preventing them from being overwhelmed by data used in other groups. Keep in mind that groups can share data with each other if necessary.

Bring Your Existing Data

If you have observations stored in a spreadsheet, you can easily import them into SpeciesHub. Here's a general overview of the upload process:

  1. Prepare your data: Format your table of observations according to the SpeciesHub template (download here). Refer to our support article, "Preparing a Table for Upload to SpeciesHub",   for detailed instructions.
  2. Upload the file: Navigate to the Upload page within SpeciesHub. Select the spreadsheet containing your observations. The application will analyze your file, identify potential issues, and display data previews. If everything is in order, proceed with the upload process. Refer to our support article, "How to Upload a Dataset", for detailed guidance.
  3. Monitor the upload: The upload will commence in the background. You'll receive a notification once the upload is complete. Refresh the app to view the newly imported sites.

Note: Free users are limited to 200 kilobyte spreadsheets, while premium users can upload files up to 2 MB.

Access on Any Device

SpeciesHub is designed to work seamlessly on various devices, including PCs, tablets, and smartphones. Access all our data conveniently through your web browser or by downloading our Android app from the Google Play Store.

Explore the Basics

Watch our introductory video to learn about SpeciesHub's key features and concepts.

                         

Data Management

How to upload a dataset

Learn how to upload existing observations from spreadsheet to SpeciesHub

If you already have observations in a spreadsheet, you can easily upload them to SpeciesHub. Follow these steps:

  1. Prepare your data:
  2. Upload the file: 
    • Go to the Upload page in SpeciesHub.
    • Select your spreadsheet containing observations.
    • The app will check your file and show a report.
  3. Fix any issues:
    • The report might highlight common problems like misspelled species names or unrecognized authors.
    • You can add missing authors, but species names need correction in the file itself (re-upload after fixing).
    • For unrecognized species names, use GBIF species search (link: https://www.gbif.org/species/search).
  4. Review and upload: 
    • Data ready for upload will be displayed on a map or table. Exclude rows you don't want to import.
    • Click Next if you're happy with result.
  5. Ownership and tags:
    • Choose data ownership (private or group). Private: only you see the data unless shared. Group: all members see it (good for teams and organisations).
    • Add tags to easily filter your observations later.
    • Confirm ownership or permission to use the data.
  6. Upload and view: 
    • Click Upload to start the process (happens in the background).
    • You'll get a notification when it's done. Refresh the app to see your imported data.

Note: Free users can upload files up to 200KB, while premium users can go up to 2MB. For larger files or needing help, contact us at support@specieshub.io (additional fee may apply).

How to add an one observation

Learn how to add new site or observation using SpeciesHub

                         

Usually, creating an observation in SpeciesHub takes less than minute. With experience, you'll likely be even faster!

Follow these steps to add new observation:

  1. Navigate to the Sites or Map section of the app.
  2. Click on Add button (located in the top left corner on desktop or the bottom left corner on mobile).  
  3. In the Sites page, a Add new site dialog will appear. In the Map page, you will need to click on the place where the site is to trigger the Add new site dialog.
  4. Scientific species name: In the dropdown, you will see your recently used species. Select one or type to filter species from your list or our database. Once you find the right species name, simply select it to move on.
  5. Observation type: Select the observation type from the list. Each species or systematic group has specific observation types and fields. You can select more than one observation type, and if you are missing an observation type or field, please contact us.
  6. Coordinates (only adding via Sites page): Click on the GPS button to fill in coordinates. You will get a notification if accuracy is low.
  7. Observation date: Select the date of observation. Today is always suggested as the default.
  8. Observer: By default, the observation author will be you. However, if you're adding data on behalf of someone else, you can easily assign them credit by selecting their name. You can manage the author list in the settings.
  9. Owner: This is very important. The owner can be you or a group. In the first case, only you will see the observation. In the group case, all group members will see it immediately. This is very suitable for organizations or teams. In the free plan, you can be a member of up to five groups.
  10. Tags: Add tags for easy organization. Tags are a powerful tool for filtering your observations later, especially with large datasets. You can use them for anything relevant, like project names, species traits, or custom categories. All the tags you've used previously appear in the dropdown menu for easy selection. You can manage tag list in the settings.
  11. Notes: Type notes if you need to.
  12. The first part of the form is filled. Let's go to the second by clicking Next.
  13. In the second page, add information to the remaining fields. Some fields might be required, while others offer convenient dropdown menus for faster data entry.
  14. When you finish, click Save.

Preparing an table for upload to SpeciesHub

This guide will show you how to format an Excel Spreadsheet (XLS) for smooth and efficient upload to SpeciesHub.io

This guide will show you how to format a Microsoft Excel Spreadsheet (.xlsx) for smooth and efficient upload to SpeciesHub. Following these steps ensures your data is organized correctly and minimizes errors during import to SpeciesHub.

File Format and Data Sheet

SpeciesHub uses the .xlsx file format for data upload. All observations should be in a data sheet called "data." You can format your spreadsheet to be compatible with SpeciesHub upload, or you can simply copy your observations to our template (Downloand the template).


Column Names in Template

Do not change the existing column names in the "data" sheet. These names correspond to specific data fields within SpeciesHub, and altering them will prevent successful data import.


Coordinate System

Ensure all your location data (X and Y coordinates) are formatted in the WGS84 coordinate system. This is the standard coordinate system used by SpeciesHub for geospatial analysis.


Mandatory Fields

Several data fields are necessary for each species observation:

  • species: The scientific name of the species you observed.
  • x: The X coordinate of the observation location in WGS84 format.
  • y: The Y coordinate of the observation location in WGS84 format.
  • accuracy (optional, default 7m): If you know the accuracy of your location data, enter it here. Otherwise, the system will assign a default value of 7 meters.
  • author: Your name or the name of the person who collected the data (e.g., John Smith).
  • date (YYYY-MM-DD format): Record the date of the species observation in YYYY-MM-DD format (e.g., 2024-04-22). Currently, SpeciesHub only supports this date format.
  • notes (optional): Any additional details or comments about the observation (optional).

Additional Data

A separate sheet named "optional data fields" is included in the template. This sheet lists all the possible data fields you can use to import your species occurrence records. You can choose any relevant fields from this list and copy their names to your "data" sheet.

Next Steps

Once your data is ready for SpeciesHub, you can proceed to the  Upload page to submit it. Alternatively, refer to our support article, "How to Upload a Dataset,"  for detailed instructions.


Note: For an additional fee, we can import your data. If you are interested, contact us at support@specieshub.io.

How to search and analyze your data

Learn how to effectively search, query, analyze, and export observations in SpeciesHub

In scientific research, conservation biology, and environmental decision-making, analyzing observation data is a crucial step. SpeciesHub.io empowers you to streamline this process by offering fast and effective data search and filtering functionalities.

How to search?
To search for observations, navigate to the Sites page. Simply enter your search terms in the search field. SpeciesHub currently supports searching by the following criteria:
  • Species name: Scientific names of observed species.
  • Tags: Keywords associated with observations for further categorization.
  • Date: Observations can be filtered by date in YYYY-MM-DD format.
  • Author: Search by the name of the person who submitted the observation.
  • Observation type: Filter by the type of observation selected during data entry (e.g., visual encounter, camera trap).
  • Data owner: Search by the organization or individual managing the data.
  • General text search: Find observations containing specific terms within their descriptions.
As you type your search terms, SpeciesHub.io will provide suggestions along with the criterion it belong to.

How the search works?
Search logic narrows down results based on your search terms. Here's a breakdown of how it works:
  • Single term search: Searching for a single term, like Picea abies, will return results for that specific species (European spruce, in this case).
  • Multiple terms within the same criterion:  If you search Picea abies, and ad another species, eg. Pinus sylvatica, the result will be sites of these two species (OR argument will be used in the background).
  • Combining different criteria:  When searching for Picea abies and add observation type “Basic Plant obersvation”, only those sites containing “Basic Plant obersvation” with European spruce will be displayed  (AND argument will be used in the background).
  • Complex searches: You can combine multiple terms and criteria, e.g  adding to search  Picea abies and Pinus sylvatica and “Basic Plant obersvation” you will get list Basic Plant obersvations for both species (both OR and AND arguments will be used).

Viewing Your search results
SpeciesHub presents your search results in two ways:
  • Sites page: A table displays your filtered observations alongside a map (desktop only).
  • Map page: The corresponding observations are also displayed on a larger map view.
To see all data on the map, simply clear your search terms.

Data sharing and exporting
Sharing and exporting your filtered data is a breeze with SpeciesHub. Here's how:

Sharing:
  1. Select the observations you want to share by clicking the checkbox next to each one. This will activate the top bar (on desktop) or the bottom bar (on mobile). On desktop, you can click the 'Select All' button on the right side of the top bar to select all filtered data.
  2. Click the "Share" icon and enter the email address of the recipient or select a group name to share the data with.
  3. Click Share button.
Exporting:
  1. To export your filtered observations to an Excel spreadsheet, click the "Download" button.
  2. SpeciesHub.io will generate an XLSX file that will automatically download to your device.


How to Add Multiple Species in One Site

Learn how to efficiently add multiple observations from a single site in SpeciesHub Add Site menu.

                         

Adding observations in SpeciesHub is quick and efficient, typically taking less than a minute. With experience, you'll become even faster!

Follow these steps to add multiple species in one site:

  1. Navigate to the Sites or Map section of the app.
  2. Click on Add button (located in the top left corner on desktop or the bottom left corner on mobile).  
  3. Open the Add New Site dialog.  In the Sites page, the dialog appears immediately. In the Map page, click on the location first to trigger the dialog.
  4. Select "Multiple species" to enter multiple observations at once.
  5. Choose the category of species you plan to add. This helps filter relevant observation types.
  6. Select the observation type from the list. Different species groups have specific observation types and fields. You can select multiple observation types. If an observation type or field is missing, contact support.
  7. Enter Coordinates (only when adding via the Sites page). Click the GPS button to autofill coordinates. You’ll receive a notification if accuracy is low.
  8. Select the Observation DateToday is the default.
  9. Choose the Observer.  By default, you are the observer. If submitting on behalf of someone else, assign their name. Observer names can be managed in settings.
  10. Set the Owner. The owner can be you or a group. In the first case, only you will see the observation. In the group case, all group members will see it immediately. This is very suitable for organizations or teams. In the free plan, you can be a member of up to five groups.
  11. Add Tags for organization and filtering. Tags help manage large datasets. Use them for project names, species traits, or categories. Previously used tags appear in a dropdown for quick selection. You can manage tag list in the settings.
  12. Enter Notes if necessary.
  13. Complete the first part of the form, then click Next.
  14. On the second page, enter habitat details (if needed). Some fields may be required. Dropdown menus speed up data entry.
  15. Click Next to proceed to the last page.
  16. Select and filter species. Choose species and fill in species-related attributes. Click Add to include a species. Repeat for as many species as needed.

  17. Final Step. Click Save to submit your observations.

Collaboration Tools

How to Share and Control Access to Your Observations

Learn how to share your observations with individuals or groups and manage who has access

With SpeciesHub, you can easily control which observations are visible to external people. Here's a short guide on how to manage your observation sharing.

How to Share One or More Observations
  1. Select Observations: Choose one or several observations you want to share (you can use the search feature to filter observations and find them faster). This will activate the top bar (on desktop) or the bottom bar (on mobile).
  2. Select All (Optional): You can click the 'Select All' icon to select all filtered data.
  3. Share: Click the "Share" icon, then enter the recipient's email address or select a group name to share the data with. After that, click the "Share" button.

Share with a Person or a Group?
There are two main approaches to making your data visible to others:
  • Sharing with a Person: If you want to share data with an individual, simply enter their full email address in the sharing dialog (required due to privacy regulations).
  • Sharing with a Group: If you're sharing the same data with multiple people, or if the recipients frequently change, it's better to share the data with a group. Create a group, add the relevant people, and share the data with the group. This way, you can easily manage who sees the data by adding or removing people from the group, without having to reshare the data individually.

Where Can I See If Data Is Shared?
You can see shared data in several places:
  1. Site List: Each site that contains at least one shared observation will display an sharing icon next to it.
  2. Observation Details: By clicking on a site, you can view all observations. At the bottom of each observation, you'll see a list of people or groups with access. You can stop sharing by clicking the "X" next to a person or group.
  3. Using Search: Start typing "Shared with" to display sites shared with a specific person, group, or to view all shared sites.

How to Stop Sharing an Observation with a Specific User or Group
  1. Search for observations you are currently sharing by typing "Shared with".
  2. Select all filtered observations shared with that user or group.
  3. Open the overflow menu on the action bar and select "Remove shares".
  4. In the dialog, select the user or group to stop sharing with, then click "Remove".

How to Stop Sharing All Observations
  1. Search for observations you are sharing by typing "Shared with anyone".
  2. Select all filtered observations.
  3. Open the overflow menu on the action bar and select "Remove shares."
  4. In the dialog, select "Remove all shares" and click "Remove."

Profile & Account Settings

Your data security and privacy

Learn about account security, data management, GDPR, and privacy settings

At SpeciesHub, we prioritize your security and privacy. We safeguard your personal information with robust account security measures. Understanding and managing app permissions further strengthens your privacy control. Let's explore how SpeciesHub keeps your data secure and how you can effortlessly manage your account settings.
Account Data and Privacy
Your SpeciesHub account data is stored securely on our hosted servers, protected from unauthorized access. We implement robust security measures and conduct daily backups to safeguard your information and ensure data recovery in case of unforeseen events.
For a comprehensive overview of our commitment to data privacy and security, please refer to our Terms of Service and Privacy Policy.
Account deletion
If you're encountering issues with your account that prevent you from fully enjoying the app, reach out to our Support Team at support@specieshub.io. We're here to help!
Before deleting your profile, ensure you've canceled any active subscription plans to avoid future charges. Simply deleting your account won't cancel subscriptions or issue refunds.

How to Delete Your Account:
  1. Open the app and navigate to Settings.
  2. Tap on Profile.
  3. Locate and click the Delete Account button.

A Few Things to Note:
  • You have a 10-day grace period to change your mind.
  • If you wish to cancel the deletion within this timeframe, contact us at support@specieshub.io.
  • After 10 days, your account and all associated data will be permanently removed.
Data requests (GDPR)
To request your data according to GDPR guidelines, contact us directly at privacy@specieshub.io from the email address registered with your SpeciesHub account. Our team will process your request within 4-5 business days.
Data deletion (GDPR)
To permanently remove your data from our servers, contact us at privacy@specieshub.io from the email address registered with your SpeciesHub account. Be aware that deletion is irreversible - you won't be able to retrieve your data once it's removed.
Note that for privacy and security reasons, only account owners can submit data deletion requests. After processing your request, you'll receive a confirmation email with a link to log in and confirm deletion. Upon confirmation, all your data will be permanently removed.

How to register, log-in and out of your account

Learn how to securely register, log in and out to your SpeciesHub account

By creating a SpeciesHub account, you gain access to a unified platform for managing and analyzing your data across multiple devices. Seamlessly sync your observations, conduct fast analyses, and collaborate with colleagues on your phone, tablet, or computer. SpeciesHub currently supports Android, Web, and Windows platforms, offering flexibility and accessibility. iOS support is forthcoming.
Creating Your SpeciesHub Account
Currently, you can create a SpeciesHub account using your Google account. Facebook and Apple ID options will be available soon.
  1. Go to Register page.
  2. Accept our Terms and Conditions to proceed.
  3. Click the "Continue with Google" button.
  4. If prompted, enter your Google email and password.
  5. Follow the on-screen instructions to go to the next screen.
After registration, you will need to choose your plan. Select the one that suits you best. You can always change it in the User Settings page.
Logging In to Your SpeciesHub Account
Currently, you can log in to SpeciesHub only using your Google account. Other options like Facebook and Apple ID will be added in the future.
  1. Go to Login page.
  2. Click the "Continue with Google" button.
  3. If prompted, enter your Google email and password.
Logging Out of Your SpeciesHub Account
  1. Tap the user icon in the top right corner of the app
  2. Choose the "Log Out" option.

FAQ

Why does the Filter only work after I type the whole word?

This issue may be related to how certain keyboard apps on Mobile devices handle predictive text or auto-suggestions.

This issue may be related to how certain keyboard apps handle predictive text or auto-suggestions. Some keyboards may interfere with real-time filtering by delaying the input until you've completed typing or selected a suggestion.

Possible Solutions:
1. Switch Keyboard App: Changing to a different keyboard app (e.g., Google Gboard) can resolve the issue. Some keyboards are known to handle inputs and suggestions more effectively for real-time filtering.

2. Disable Predictive Text: You can also resolve the issue by disabling predictive text in your keyboard settings. This prevents the keyboard from holding input until a suggestion is confirmed.

3. Use Another Device: If switching the keyboard or disabling predictive text isn't feasible, using the app on another device might offer a smoother experience.

If you continue experiencing issues, please contact support for further assistance.

How to filter species by epithet when adding a new observation?

Typing a space followed by the epithet in the Scientific species name field will filter species by their epithet

You can filter species by epithet when adding a new observation. In the Scientific species name field, type a space followed by the epithet (e.g., " sapiens"). The app will recognize that you're searching for a species epithet and display relevant results.